What a word is is somewhat debated, but the longest non-agglutinative "word" is given by wikku9 above me. The post length limit prevents it from being displayed here in full.
As Felix said, it depends on what you classify as a word. That huge long word is essentially the entire protein capsule of a virus, (woot, didn't need to look it up!). As for the lodging of silicon particles in your lungs, that to is a bit iffy, as it is a medical condition and you would not find it in a normal dictionary